Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888884.1_cds_XP_016443518.1_38672
CDS Infomation

[gene=LOC107768871] [db_xref=GeneID:107768871] [protein=calcium uptake protein 1, mitochondrial-like isoform X2] [protein_id=XP_016443518.1] [location=join(153195..153444,153535..153602,157738..157961,158177..158260,159163..159376,160053..160349,160603..160747,160823..160833)] [gbkey=CDS]
Sequence

ATGTCAGCTTGGTCAGCTCTCCGGCGATCTCCACGCTCGGTCCATCGTCTGTACATAAAC
CAATTCCGCCATATTCGTCATTTAAGTGGAAGTGATAATCCAGAAAGCAGTCCAATTTCT
TTCCTCAAATGGGTTGGTGGAATCACTTTAGCTTTCGCACTTTACTCTTATTCTCTCCCC
AATTCTTCTTTGTCTTTTGCTGATACTTCACAATCTCTTCATCATCCTCCACCTAAATAT
CTCATTGGAGATGCTTACAGAAGAAAAGTATTCTTTAATTATGAAAAGCGTATCCGGATG
CGAAGTCCTCCTGAAAAGGTGTTTGAGTACTTTGCATCTTTTGAAGCCGATGATGGAGAA
ATATTTATGACACCAGCAGATCTAATGAGAGCAGTTGTTCCTGTGTTCCCTCCATCTGAA
TCACACCTCGTGAGAGATGGATATCTTAGAGGTGAAAGAAGTCCCGGTGAACTGCAATGT
GCCCCTTCAAAGTTTTTTATGCTTTTTGACACAAACAGTGATGGCCGTGTATCTTTCAAA
GAGTATATATTCTTTGTCACCCTGCTCAGTATCCCTGAATCAAGTTTTTCAGTGGCATTC
AAGATGTTTGATCTCGACTGTAATGGCGAGATAGACATTGATGAATTCAAGAAAGTAATG
ACTTTGATGCGAACTCACAACAGACAAGGTGCTCATCACAGCGATGGACTTCGAGGGGGG
CGTAATTTAGGTGGTCATGTAGAGAATGGAGGTCTGTTGCAAGACTTCTTTGGTGAAGAT
GGGAAGAAACGCCTCCAATATGATAGATTTGTCCGATTCTTGAGAGATCTGCATGAAGAA
ATGCTAAAATTGGAGTTTGCCCACTATGATTACAAGTTTCGGGGGACCATTTCAGCAAAG
GATTTTGCCCTGTCCATGGTTGCTGCTGCTGATTTGAAGTACTTAAACAAGTTGCTTGAT
CGAGTTGATGATTTAGATAATGAGTCACCGCTAAGTCGTATTAAGATTTCATTTGAGGAA
TTCAAAAGTTTTGCTGAGCTGCGGAAGAAGCTGCAACCGTTTTCACTAGCACTTTTCTGT
TTCGGGCAAGTGAATGGTCGTTTGACAAGAATTGATTTTAAAAGAGCTGCTTCTCAGGTA
TGTGGAGTTTCTCTCACTGACAACGTGATAGAAATTGTCTTCCATGTTTTCGATACAAAT
CATGATGGAAATTTAAGCTCAGACGAGTTTATTCGAGTCTTAGAGAAGCGAGAAAGGGAT
ATTGCTGAGCCAACCGAAGCAGCCTCTTGTTGA

Peptide Sequence

PEP ID

XP_016443518.1
PEP Infomation

PREDICTED: calcium uptake protein 1, mitochondrial-like isoform X2 [Nicotiana tabacum]
Sequence

MSAWSALRRSPRSVHRLYINQFRHIRHLSGSDNPESSPISFLKWVGGITLAFALYSYSLP
NSSLSFADTSQSLHHPPPKYLIGDAYRRKVFFNYEKRIRMRSPPEKVFEYFASFEADDGE
IFMTPADLMRAVVPVFPPSESHLVRDGYLRGERSPGELQCAPSKFFMLFDTNSDGRVSFK
EYIFFVTLLSIPESSFSVAFKMFDLDCNGEIDIDEFKKVMTLMRTHNRQGAHHSDGLRGG
RNLGGHVENGGLLQDFFGEDGKKRLQYDRFVRFLRDLHEEMLKLEFAHYDYKFRGTISAK
DFALSMVAAADLKYLNKLLDRVDDLDNESPLSRIKISFEEFKSFAELRKKLQPFSLALFC
FGQVNGRLTRIDFKRAASQVCGVSLTDNVIEIVFHVFDTNHDGNLSSDEFIRVLEKRERD
IAEPTEAASC

Transcript Sequence

Gene sequence data has not been registered.